Study

Sequence-audited comparative genomics of genome-maintenance genes in vertebrate lifespan evolution

Processed data and frozen outputs supporting the manuscript “Sequence-audited comparative genomics of genome-maintenance genes in vertebrate lifespan evolution.” The archive includes source data for four main figures, 41 supplementary data tables, a dated species tree, protein alignments, gene-family trees, a reproducibility guide, and SHA-256 checksums.

Authors

Si Li1Yanyan Huang2

  1. 1Hebei University of Technology
  2. 2School of Chemical Engineering and Technology, Hebei University of Technology

Abstract

Processed data and frozen outputs supporting the manuscript “Sequence-audited comparative genomics of genome-maintenance genes in vertebrate lifespan evolution.” The archive includes source data for four main figures, 41 supplementary data tables, a dated species tree, protein alignments, gene-family trees, a reproducibility guide, and SHA-256 checksums. Analysis code is available at https://github.com/jackeikee-debug/nature-bird-lifespan, release v1.0.0.

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This page presents preserved, source-backed released materials.
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Figure 1 Design Counts

Released values from submission:submission-0874a5a043ddb0a424e0af00:1/nature-bird-lifespan-data-v1.0.0.zip!/Source_Data/Figure_1_design_counts.tsv, rendered as a deterministic bar chart.

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Figure 1 Design Counts

Released values from submission:submission-0874a5a043ddb0a424e0af00:1/nature-bird-lifespan-data-v1.0.0.zip!/Source_Data/Figure_1_design_counts.tsv, rendered as a deterministic bar chart.

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Figure 2 Module Ranking

Released values from submission:submission-0874a5a043ddb0a424e0af00:1/nature-bird-lifespan-data-v1.0.0.zip!/Source_Data/Figure_2_module_ranking.tsv, rendered as a deterministic bar chart.

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Figure 2 Module Ranking

Released values from submission:submission-0874a5a043ddb0a424e0af00:1/nature-bird-lifespan-data-v1.0.0.zip!/Source_Data/Figure_2_module_ranking.tsv, rendered as a deterministic bar chart.

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Figure 3 Evidence By Gene

Released values from submission:submission-0874a5a043ddb0a424e0af00:1/nature-bird-lifespan-data-v1.0.0.zip!/Source_Data/Figure_3_evidence_by_gene.tsv, rendered as a deterministic bar chart.

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Figure 3 Evidence By Gene

Released values from submission:submission-0874a5a043ddb0a424e0af00:1/nature-bird-lifespan-data-v1.0.0.zip!/Source_Data/Figure_3_evidence_by_gene.tsv, rendered as a deterministic bar chart.

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Figure 3 Evidence Waterfall

Released values from submission:submission-0874a5a043ddb0a424e0af00:1/nature-bird-lifespan-data-v1.0.0.zip!/Source_Data/Figure_3_evidence_waterfall.tsv, rendered as a deterministic bar chart.

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Figure 3 Evidence Waterfall

Released values from submission:submission-0874a5a043ddb0a424e0af00:1/nature-bird-lifespan-data-v1.0.0.zip!/Source_Data/Figure_3_evidence_waterfall.tsv, rendered as a deterministic bar chart.

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Figure 4 Samhd1 Leave One Species

Released values from submission:submission-0874a5a043ddb0a424e0af00:1/nature-bird-lifespan-data-v1.0.0.zip!/Source_Data/Figure_4_samhd1_leave_one_species.tsv, rendered as a deterministic bar chart.

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Figure 4 Samhd1 Leave One Species

Released values from submission:submission-0874a5a043ddb0a424e0af00:1/nature-bird-lifespan-data-v1.0.0.zip!/Source_Data/Figure_4_samhd1_leave_one_species.tsv, rendered as a deterministic bar chart.

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Figure 4 Samhd1 Robustness

Released values from submission:submission-0874a5a043ddb0a424e0af00:1/nature-bird-lifespan-data-v1.0.0.zip!/Source_Data/Figure_4_samhd1_robustness.tsv, rendered as a deterministic bar chart.

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Figure 4 Samhd1 Robustness

Released values from submission:submission-0874a5a043ddb0a424e0af00:1/nature-bird-lifespan-data-v1.0.0.zip!/Source_Data/Figure_4_samhd1_robustness.tsv, rendered as a deterministic bar chart.

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