Study

Sequence-audited comparative genomics of genome-maintenance genes in vertebrate lifespan evolution

Processed data and frozen outputs supporting the manuscript “Sequence-audited comparative genomics of genome-maintenance genes in vertebrate lifespan evolution.” The archive includes source data for four main figures, 41 supplementary data tables, a dated species tree, protein alignments, gene-family trees, a reproducibility guide, and SHA-256 checksums.

Authors

Si Li1Yanyan Huang2

  1. 1Hebei University of Technology
  2. 2School of Chemical Engineering and Technology, Hebei University of Technology

Abstract

Processed data and frozen outputs supporting the manuscript “Sequence-audited comparative genomics of genome-maintenance genes in vertebrate lifespan evolution.” The archive includes source data for four main figures, 41 supplementary data tables, a dated species tree, protein alignments, gene-family trees, a reproducibility guide, and SHA-256 checksums. Analysis code is available at https://github.com/jackeikee-debug/nature-bird-lifespan, release v1.0.0.

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This page presents preserved, source-backed released materials.
Evidence does not infer results absent from the immutable sources.
Scientific commitbf6ac86b961d
Result tables50
CoverageComplete
LicenseCreative Commons Attribution 4.0 International

Source inventory

Deterministically extracted immutable study materials.

Repositories1
Result tables50
Charts37
Released figures18
Source datasets50
Complete tables50

Extracted study record

Authoritative metadata and released result artifacts.

The preserved source contains 50 result tables; 50 have complete deterministic representation coverage.

Figure S2

Scientific figure released as submission:submission-0874a5a043ddb0a424e0af00:1/nature-bird-lifespan-data-v1.0.0.zip!/Figures/Supplementary/Figure_S2.png.

Evidence visualization

Figure S2

Scientific figure released as submission:submission-0874a5a043ddb0a424e0af00:1/nature-bird-lifespan-data-v1.0.0.zip!/Figures/Supplementary/Figure_S2.png.

Released scientific figure: Figure S2
The original immutable figure is shown without reinterpretation or generated annotations.
SHA-256 verified
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File
submission:submission-0874a5a043ddb0a424e0af00:1/nature-bird-lifespan-data-v1.0.0.zip!/Figures/Supplementary/Figure_S2.png
Version
released
Integrity
2ab714a0…55b1cf

Figure S3

Scientific figure released as submission:submission-0874a5a043ddb0a424e0af00:1/nature-bird-lifespan-data-v1.0.0.zip!/Figures/Supplementary/Figure_S3.png.

Evidence visualization

Figure S3

Scientific figure released as submission:submission-0874a5a043ddb0a424e0af00:1/nature-bird-lifespan-data-v1.0.0.zip!/Figures/Supplementary/Figure_S3.png.

Released scientific figure: Figure S3
The original immutable figure is shown without reinterpretation or generated annotations.
SHA-256 verified
Source & verification
File
submission:submission-0874a5a043ddb0a424e0af00:1/nature-bird-lifespan-data-v1.0.0.zip!/Figures/Supplementary/Figure_S3.png
Version
released
Integrity
373aebb9…13eac1

Figure S4a

Scientific figure released as submission:submission-0874a5a043ddb0a424e0af00:1/nature-bird-lifespan-data-v1.0.0.zip!/Figures/Supplementary/Figure_S4a.png.

Evidence visualization

Figure S4a

Scientific figure released as submission:submission-0874a5a043ddb0a424e0af00:1/nature-bird-lifespan-data-v1.0.0.zip!/Figures/Supplementary/Figure_S4a.png.

Released scientific figure: Figure S4a
The original immutable figure is shown without reinterpretation or generated annotations.
SHA-256 verified
Source & verification
File
submission:submission-0874a5a043ddb0a424e0af00:1/nature-bird-lifespan-data-v1.0.0.zip!/Figures/Supplementary/Figure_S4a.png
Version
released
Integrity
51ebcc7b…7506f7

Figure S4b

Scientific figure released as submission:submission-0874a5a043ddb0a424e0af00:1/nature-bird-lifespan-data-v1.0.0.zip!/Figures/Supplementary/Figure_S4b.png.

Evidence visualization

Figure S4b

Scientific figure released as submission:submission-0874a5a043ddb0a424e0af00:1/nature-bird-lifespan-data-v1.0.0.zip!/Figures/Supplementary/Figure_S4b.png.

Released scientific figure: Figure S4b
The original immutable figure is shown without reinterpretation or generated annotations.
SHA-256 verified
Source & verification
File
submission:submission-0874a5a043ddb0a424e0af00:1/nature-bird-lifespan-data-v1.0.0.zip!/Figures/Supplementary/Figure_S4b.png
Version
released
Integrity
e4c50327…a0d00b

Figure S4c

Scientific figure released as submission:submission-0874a5a043ddb0a424e0af00:1/nature-bird-lifespan-data-v1.0.0.zip!/Figures/Supplementary/Figure_S4c.png.

Evidence visualization

Figure S4c

Scientific figure released as submission:submission-0874a5a043ddb0a424e0af00:1/nature-bird-lifespan-data-v1.0.0.zip!/Figures/Supplementary/Figure_S4c.png.

Released scientific figure: Figure S4c
The original immutable figure is shown without reinterpretation or generated annotations.
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Source & verification
File
submission:submission-0874a5a043ddb0a424e0af00:1/nature-bird-lifespan-data-v1.0.0.zip!/Figures/Supplementary/Figure_S4c.png
Version
released
Integrity
46782740…6a0a6d

Figure S4d

Scientific figure released as submission:submission-0874a5a043ddb0a424e0af00:1/nature-bird-lifespan-data-v1.0.0.zip!/Figures/Supplementary/Figure_S4d.png.

Evidence visualization

Figure S4d

Scientific figure released as submission:submission-0874a5a043ddb0a424e0af00:1/nature-bird-lifespan-data-v1.0.0.zip!/Figures/Supplementary/Figure_S4d.png.

Released scientific figure: Figure S4d
The original immutable figure is shown without reinterpretation or generated annotations.
SHA-256 verified
Source & verification
File
submission:submission-0874a5a043ddb0a424e0af00:1/nature-bird-lifespan-data-v1.0.0.zip!/Figures/Supplementary/Figure_S4d.png
Version
released
Integrity
7b1a56e1…14fe17

Deterministic extraction method

No generative model selected, summarized, or transformed the results.

Evidence classified preserved repository files, parsed bounded structured tables, inferred column types, and selected registered components using versioned rules.

Data and provenance

Immutable publication and repository sources.

Pinned repositorybf6ac86b961d575f3524b994dcce9fff993637beOpenPublication record10.5281/zenodo.20798437Open

Reuse boundary

Only released and preserved source rows are displayed.

No model is rerun and no missing value is inferred.

Pinned scientific commit: bf6ac86b961d575f3524b994dcce9fff993637be

Limitations

Deterministic coverage boundaries.

Every accepted released table cell is represented by registered Evidence components; unstructured claims are not converted into numerical results.

Citation

Cite the scholarly record and pinned analysis source.

Scholarly publication

Si Li, Yanyan Huang. Sequence-audited comparative genomics of genome-maintenance genes in vertebrate lifespan evolution. 10.5281/zenodo.20798437.

Open publication

Pinned analysis source

https://github.com/jackeikee-debug/nature-bird-lifespan, commit bf6ac86b961d575f3524b994dcce9fff993637be.

Open pinned source